Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.37□□□□□ -0.43
Srp9P49962 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Gm7862-201ENSMUST00000121461 292 ntBASIC12.37□□□□□ -0.43
Srp9P49962 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Srp9P49962 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Srp9P49962 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Gm5864-201ENSMUST00000202263 970 ntBASIC12.37□□□□□ -0.43
Srp9P49962 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Srp9P49962 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Srp9P49962 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Srp9P49962 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Srp9P49962 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.37□□□□□ -0.43
Srp9P49962 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.37□□□□□ -0.43
Srp9P49962 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Srp9P49962 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.36□□□□□ -0.43
Srp9P49962 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Srp9P49962 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Srp9P49962 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Srp9P49962 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Srp9P49962 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 Gm12008-201ENSMUST00000117791 755 ntBASIC12.36□□□□□ -0.43
Srp9P49962 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Srp9P49962 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Srp9P49962 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.36□□□□□ -0.43
Srp9P49962 Gm6550-201ENSMUST00000187574 993 ntBASIC12.36□□□□□ -0.43
Srp9P49962 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.36□□□□□ -0.43
Srp9P49962 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.36□□□□□ -0.43
Srp9P49962 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.36□□□□□ -0.43
Srp9P49962 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.36□□□□□ -0.43
Srp9P49962 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Srp9P49962 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Srp9P49962 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Srp9P49962 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.36□□□□□ -0.43
Srp9P49962 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Srp9P49962 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Srp9P49962 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Srp9P49962 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Srp9P49962 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Srp9P49962 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Srp9P49962 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Srp9P49962 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Srp9P49962 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Srp9P49962 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Srp9P49962 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Srp9P49962 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Srp9P49962 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Srp9P49962 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Srp9P49962 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Srp9P49962 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Srp9P49962 Gm11764-201ENSMUST00000120221 623 ntBASIC12.35□□□□□ -0.43
Srp9P49962 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.35□□□□□ -0.43
Srp9P49962 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.35□□□□□ -0.43
Srp9P49962 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.35□□□□□ -0.43
Srp9P49962 Gm10499-201ENSMUST00000174094 934 ntBASIC12.35□□□□□ -0.43
Srp9P49962 Gm9682-201ENSMUST00000197505 556 ntBASIC12.35□□□□□ -0.43
Srp9P49962 Gm10060-201ENSMUST00000212002 111 ntBASIC12.35□□□□□ -0.43
Srp9P49962 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms