Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.23■□□□□ 0.35
Ercc3P49135 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ercc3P49135 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ercc3P49135 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.23■□□□□ 0.35
Ercc3P49135 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Ercc3P49135 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ercc3P49135 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Gm25948-201ENSMUST00000175334 112 ntBASIC17.23■□□□□ 0.35
Ercc3P49135 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.23■□□□□ 0.35
Ercc3P49135 Olfr286-202ENSMUST00000205305 969 ntBASIC17.23■□□□□ 0.35
Ercc3P49135 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.23■□□□□ 0.35
Ercc3P49135 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Ercc3P49135 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ercc3P49135 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ercc3P49135 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc3P49135 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc3P49135 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc3P49135 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc3P49135 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc3P49135 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc3P49135 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc3P49135 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc3P49135 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc3P49135 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc3P49135 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc3P49135 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc3P49135 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc3P49135 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ercc3P49135 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.22■□□□□ 0.35
Ercc3P49135 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.22■□□□□ 0.35
Ercc3P49135 Gm5312-201ENSMUST00000203728 547 ntBASIC17.22■□□□□ 0.35
Ercc3P49135 Gm45098-201ENSMUST00000207179 657 ntBASIC17.22■□□□□ 0.35
Ercc3P49135 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.22■□□□□ 0.35
Ercc3P49135 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc3P49135 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc3P49135 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc3P49135 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc3P49135 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ercc3P49135 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Ercc3P49135 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc3P49135 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ercc3P49135 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc3P49135 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ercc3P49135 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc3P49135 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc3P49135 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc3P49135 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc3P49135 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc3P49135 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc3P49135 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc3P49135 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc3P49135 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc3P49135 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Ercc3P49135 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc3P49135 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc3P49135 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc3P49135 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc3P49135 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.21■□□□□ 0.35
Ercc3P49135 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.21■□□□□ 0.35
Ercc3P49135 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc3P49135 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc3P49135 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ercc3P49135 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc3P49135 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc3P49135 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.21■□□□□ 0.35
Ercc3P49135 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.21■□□□□ 0.35
Ercc3P49135 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ercc3P49135 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.2■□□□□ 0.34
Ercc3P49135 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc3P49135 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc3P49135 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ercc3P49135 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ercc3P49135 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc3P49135 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc3P49135 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc3P49135 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.2■□□□□ 0.34
Ercc3P49135 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ercc3P49135 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.2■□□□□ 0.34
Ercc3P49135 Gm38225-201ENSMUST00000194001 393 ntBASIC17.2■□□□□ 0.34
Ercc3P49135 Gm37230-201ENSMUST00000194491 818 ntBASIC17.2■□□□□ 0.34
Ercc3P49135 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms