Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfx3P48381 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rfx3P48381 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.13□□□□□ -0.31
Rfx3P48381 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Rfx3P48381 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfx3P48381 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.13□□□□□ -0.31
Rfx3P48381 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.13□□□□□ -0.31
Rfx3P48381 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfx3P48381 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rfx3P48381 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfx3P48381 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.13□□□□□ -0.31
Rfx3P48381 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rfx3P48381 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Rfx3P48381 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.12□□□□□ -0.31
Rfx3P48381 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.12□□□□□ -0.31
Rfx3P48381 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.12□□□□□ -0.31
Rfx3P48381 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rfx3P48381 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rfx3P48381 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.12□□□□□ -0.31
Rfx3P48381 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.12□□□□□ -0.31
Rfx3P48381 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.12□□□□□ -0.31
Rfx3P48381 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.12□□□□□ -0.31
Rfx3P48381 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.12□□□□□ -0.31
Rfx3P48381 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Rfx3P48381 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.12□□□□□ -0.31
Rfx3P48381 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfx3P48381 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.12□□□□□ -0.31
Rfx3P48381 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rfx3P48381 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfx3P48381 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfx3P48381 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfx3P48381 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfx3P48381 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.11□□□□□ -0.31
Rfx3P48381 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfx3P48381 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfx3P48381 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfx3P48381 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfx3P48381 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rfx3P48381 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfx3P48381 Gm2651-201ENSMUST00000203560 838 ntBASIC13.11□□□□□ -0.31
Rfx3P48381 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfx3P48381 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfx3P48381 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfx3P48381 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfx3P48381 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Rfx3P48381 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfx3P48381 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfx3P48381 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.11□□□□□ -0.31
Rfx3P48381 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Rfx3P48381 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Rfx3P48381 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Rfx3P48381 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfx3P48381 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfx3P48381 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfx3P48381 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.11□□□□□ -0.31
Rfx3P48381 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Rfx3P48381 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfx3P48381 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rfx3P48381 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rfx3P48381 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.1□□□□□ -0.31
Rfx3P48381 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Rfx3P48381 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.1□□□□□ -0.31
Rfx3P48381 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfx3P48381 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms