Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx2P48379 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx2P48379 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx2P48379 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rfx2P48379 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx2P48379 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.22■□□□□ 0.03
Rfx2P48379 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rfx2P48379 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx2P48379 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.22■□□□□ 0.03
Rfx2P48379 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx2P48379 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.22■□□□□ 0.03
Rfx2P48379 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.22■□□□□ 0.03
Rfx2P48379 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx2P48379 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.22■□□□□ 0.03
Rfx2P48379 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.22■□□□□ 0.03
Rfx2P48379 Gm15483-201ENSMUST00000120338 456 ntBASIC15.22■□□□□ 0.03
Rfx2P48379 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx2P48379 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.22■□□□□ 0.03
Rfx2P48379 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.22■□□□□ 0.03
Rfx2P48379 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Rfx2P48379 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx2P48379 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.22■□□□□ 0.03
Rfx2P48379 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.22■□□□□ 0.03
Rfx2P48379 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.22■□□□□ 0.03
Rfx2P48379 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
Rfx2P48379 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.22■□□□□ 0.03
Rfx2P48379 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.22■□□□□ 0.03
Rfx2P48379 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx2P48379 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx2P48379 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx2P48379 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.22■□□□□ 0.03
Rfx2P48379 Celf4-206ENSMUST00000224553 1729 ntBASIC15.22■□□□□ 0.03
Rfx2P48379 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx2P48379 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rfx2P48379 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx2P48379 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx2P48379 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rfx2P48379 Carlr-201ENSMUST00000181515 2574 ntBASIC15.22■□□□□ 0.03
Rfx2P48379 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rfx2P48379 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rfx2P48379 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rfx2P48379 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Rfx2P48379 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rfx2P48379 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 Gm27622-201ENSMUST00000183779 60 ntBASIC15.21■□□□□ 0.03
Rfx2P48379 Gm27920-201ENSMUST00000183953 96 ntBASIC15.21■□□□□ 0.03
Rfx2P48379 Gm18049-201ENSMUST00000208909 581 ntBASIC15.21■□□□□ 0.03
Rfx2P48379 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rfx2P48379 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.21■□□□□ 0.03
Rfx2P48379 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rfx2P48379 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rfx2P48379 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rfx2P48379 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Rfx2P48379 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Rfx2P48379 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rfx2P48379 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rfx2P48379 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rfx2P48379 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx2P48379 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx2P48379 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx2P48379 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx2P48379 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx2P48379 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx2P48379 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx2P48379 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.2■□□□□ 0.02
Rfx2P48379 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx2P48379 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.2■□□□□ 0.02
Rfx2P48379 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx2P48379 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx2P48379 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx2P48379 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx2P48379 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.2■□□□□ 0.02
Rfx2P48379 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx2P48379 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx2P48379 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx2P48379 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx2P48379 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rfx2P48379 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms