Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nedd4P46935 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd4P46935 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd4P46935 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nedd4P46935 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.34■□□□□ 0.37
Nedd4P46935 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd4P46935 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd4P46935 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.34■□□□□ 0.37
Nedd4P46935 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd4P46935 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd4P46935 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.34■□□□□ 0.37
Nedd4P46935 Gm27514-201ENSMUST00000183692 110 ntBASIC17.34■□□□□ 0.37
Nedd4P46935 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Nedd4P46935 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd4P46935 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd4P46935 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd4P46935 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd4P46935 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nedd4P46935 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Nedd4P46935 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nedd4P46935 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Nedd4P46935 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.34■□□□□ 0.37
Nedd4P46935 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nedd4P46935 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nedd4P46935 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nedd4P46935 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nedd4P46935 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nedd4P46935 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nedd4P46935 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Nedd4P46935 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.33■□□□□ 0.36
Nedd4P46935 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd4P46935 Gm12384-201ENSMUST00000119228 919 ntBASIC17.33■□□□□ 0.36
Nedd4P46935 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd4P46935 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Nedd4P46935 Gm4804-201ENSMUST00000182234 999 ntBASIC17.33■□□□□ 0.36
Nedd4P46935 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.33■□□□□ 0.36
Nedd4P46935 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.33■□□□□ 0.36
Nedd4P46935 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd4P46935 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.33■□□□□ 0.36
Nedd4P46935 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC17.33■□□□□ 0.36
Nedd4P46935 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd4P46935 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Nedd4P46935 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd4P46935 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd4P46935 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd4P46935 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd4P46935 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd4P46935 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd4P46935 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd4P46935 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd4P46935 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.33■□□□□ 0.36
Nedd4P46935 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd4P46935 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd4P46935 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd4P46935 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd4P46935 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nedd4P46935 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Nedd4P46935 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nedd4P46935 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.32■□□□□ 0.36
Nedd4P46935 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nedd4P46935 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nedd4P46935 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.32■□□□□ 0.36
Nedd4P46935 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nedd4P46935 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nedd4P46935 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nedd4P46935 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC17.32■□□□□ 0.36
Nedd4P46935 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC17.32■□□□□ 0.36
Nedd4P46935 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC17.32■□□□□ 0.36
Nedd4P46935 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC17.32■□□□□ 0.36
Nedd4P46935 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Nedd4P46935 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nedd4P46935 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.32■□□□□ 0.36
Nedd4P46935 Gm40466-201ENSMUST00000212174 422 ntBASIC17.32■□□□□ 0.36
Nedd4P46935 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nedd4P46935 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nedd4P46935 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.32■□□□□ 0.36
Nedd4P46935 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Nedd4P46935 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Nedd4P46935 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd4P46935 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC17.31■□□□□ 0.36
Nedd4P46935 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd4P46935 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Nedd4P46935 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd4P46935 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.31■□□□□ 0.36
Nedd4P46935 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd4P46935 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd4P46935 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd4P46935 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nedd4P46935 Gm9726-201ENSMUST00000180321 678 ntBASIC17.31■□□□□ 0.36
Nedd4P46935 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd4P46935 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.31■□□□□ 0.36
Nedd4P46935 Gm37466-201ENSMUST00000195692 652 ntBASIC17.31■□□□□ 0.36
Nedd4P46935 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC17.31■□□□□ 0.36
Nedd4P46935 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd4P46935 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Nedd4P46935 Gm17383-201ENSMUST00000078739 1041 ntBASIC17.31■□□□□ 0.36
Nedd4P46935 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd4P46935 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd4P46935 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nedd4P46935 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms