Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Gm6296-201ENSMUST00000222599 943 ntBASIC14.63□□□□□ -0.07
Fen1P39749 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Fen1P39749 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.63□□□□□ -0.07
Fen1P39749 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Fen1P39749 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.62□□□□□ -0.07
Fen1P39749 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.62□□□□□ -0.07
Fen1P39749 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Fen1P39749 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 Gm15372-201ENSMUST00000120729 834 ntBASIC14.62□□□□□ -0.07
Fen1P39749 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 Gm43347-201ENSMUST00000200226 580 ntBASIC14.62□□□□□ -0.07
Fen1P39749 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.62□□□□□ -0.07
Fen1P39749 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Fen1P39749 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Fen1P39749 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Fen1P39749 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Fen1P39749 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Fen1P39749 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.62□□□□□ -0.07
Fen1P39749 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fen1P39749 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Fen1P39749 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fen1P39749 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.61□□□□□ -0.07
Fen1P39749 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Fen1P39749 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fen1P39749 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Fen1P39749 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Fen1P39749 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.61□□□□□ -0.07
Fen1P39749 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Fen1P39749 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.61□□□□□ -0.07
Fen1P39749 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.61□□□□□ -0.07
Fen1P39749 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fen1P39749 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fen1P39749 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fen1P39749 Birc2-201ENSMUST00000054878 378 ntBASIC14.61□□□□□ -0.07
Fen1P39749 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fen1P39749 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Fen1P39749 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fen1P39749 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Fen1P39749 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.61□□□□□ -0.07
Fen1P39749 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.61□□□□□ -0.07
Fen1P39749 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Fen1P39749 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fen1P39749 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fen1P39749 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Fen1P39749 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Fen1P39749 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.6□□□□□ -0.07
Fen1P39749 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Fen1P39749 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.6□□□□□ -0.07
Fen1P39749 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms