Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.46□□□□□ -0.09
LdlrP35951 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.46□□□□□ -0.09
LdlrP35951 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.46□□□□□ -0.09
LdlrP35951 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LdlrP35951 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LdlrP35951 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LdlrP35951 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LdlrP35951 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LdlrP35951 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LdlrP35951 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.46□□□□□ -0.1
LdlrP35951 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.45□□□□□ -0.1
LdlrP35951 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LdlrP35951 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LdlrP35951 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LdlrP35951 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
LdlrP35951 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LdlrP35951 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LdlrP35951 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LdlrP35951 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LdlrP35951 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.45□□□□□ -0.1
LdlrP35951 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LdlrP35951 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LdlrP35951 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.45□□□□□ -0.1
LdlrP35951 Gm37153-201ENSMUST00000193637 231 ntBASIC14.45□□□□□ -0.1
LdlrP35951 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LdlrP35951 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.45□□□□□ -0.1
LdlrP35951 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.45□□□□□ -0.1
LdlrP35951 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
LdlrP35951 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LdlrP35951 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LdlrP35951 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
LdlrP35951 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LdlrP35951 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LdlrP35951 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.45□□□□□ -0.1
LdlrP35951 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LdlrP35951 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LdlrP35951 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.45□□□□□ -0.1
LdlrP35951 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LdlrP35951 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.45□□□□□ -0.1
LdlrP35951 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.45□□□□□ -0.1
LdlrP35951 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LdlrP35951 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LdlrP35951 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
LdlrP35951 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.44□□□□□ -0.1
LdlrP35951 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.44□□□□□ -0.1
LdlrP35951 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.44□□□□□ -0.1
LdlrP35951 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.44□□□□□ -0.1
LdlrP35951 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
LdlrP35951 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LdlrP35951 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Gm5682-201ENSMUST00000173402 505 ntBASIC14.44□□□□□ -0.1
LdlrP35951 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.44□□□□□ -0.1
LdlrP35951 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
LdlrP35951 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.44□□□□□ -0.1
LdlrP35951 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LdlrP35951 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LdlrP35951 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.44□□□□□ -0.1
LdlrP35951 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LdlrP35951 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LdlrP35951 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
LdlrP35951 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.43□□□□□ -0.1
LdlrP35951 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LdlrP35951 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LdlrP35951 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LdlrP35951 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LdlrP35951 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LdlrP35951 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LdlrP35951 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.43□□□□□ -0.1
LdlrP35951 Gm11025-201ENSMUST00000140773 466 ntBASIC14.43□□□□□ -0.1
LdlrP35951 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.43□□□□□ -0.1
LdlrP35951 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.43□□□□□ -0.1
LdlrP35951 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.43□□□□□ -0.1
LdlrP35951 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.43□□□□□ -0.1
LdlrP35951 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LdlrP35951 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LdlrP35951 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
LdlrP35951 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LdlrP35951 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LdlrP35951 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms