Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Slc6a1P31648 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Slc6a1P31648 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.5□□□□□ -0.41
Slc6a1P31648 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slc6a1P31648 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a1P31648 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Slc6a1P31648 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a1P31648 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a1P31648 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a1P31648 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a1P31648 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a1P31648 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a1P31648 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a1P31648 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a1P31648 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a1P31648 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Slc6a1P31648 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Slc6a1P31648 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Slc6a1P31648 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a1P31648 Gm15165-201ENSMUST00000118140 502 ntBASIC12.49□□□□□ -0.41
Slc6a1P31648 Gm12644-201ENSMUST00000119935 606 ntBASIC12.49□□□□□ -0.41
Slc6a1P31648 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.49□□□□□ -0.41
Slc6a1P31648 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.49□□□□□ -0.41
Slc6a1P31648 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.49□□□□□ -0.41
Slc6a1P31648 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a1P31648 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.49□□□□□ -0.41
Slc6a1P31648 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.49□□□□□ -0.41
Slc6a1P31648 Rps4l-201ENSMUST00000071745 943 ntBASIC12.49□□□□□ -0.41
Slc6a1P31648 Acot6-202ENSMUST00000222921 3622 ntBASIC12.49□□□□□ -0.41
Slc6a1P31648 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Slc6a1P31648 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Slc6a1P31648 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a1P31648 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a1P31648 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Slc6a1P31648 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a1P31648 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a1P31648 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.49□□□□□ -0.41
Slc6a1P31648 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a1P31648 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Slc6a1P31648 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a1P31648 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.49□□□□□ -0.41
Slc6a1P31648 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.48□□□□□ -0.41
Slc6a1P31648 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a1P31648 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.48□□□□□ -0.41
Slc6a1P31648 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a1P31648 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a1P31648 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a1P31648 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a1P31648 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a1P31648 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a1P31648 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a1P31648 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a1P31648 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.48□□□□□ -0.41
Slc6a1P31648 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.48□□□□□ -0.41
Slc6a1P31648 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.48□□□□□ -0.41
Slc6a1P31648 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.48□□□□□ -0.41
Slc6a1P31648 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.48□□□□□ -0.41
Slc6a1P31648 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.48□□□□□ -0.41
Slc6a1P31648 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a1P31648 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.48□□□□□ -0.41
Slc6a1P31648 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a1P31648 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Slc6a1P31648 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a1P31648 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a1P31648 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a1P31648 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.48□□□□□ -0.41
Slc6a1P31648 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a1P31648 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a1P31648 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Slc6a1P31648 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Slc6a1P31648 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.47□□□□□ -0.41
Slc6a1P31648 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.47□□□□□ -0.41
Slc6a1P31648 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Slc6a1P31648 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.47□□□□□ -0.41
Slc6a1P31648 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.47□□□□□ -0.41
Slc6a1P31648 Gm18041-201ENSMUST00000218210 618 ntBASIC12.47□□□□□ -0.41
Slc6a1P31648 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a1P31648 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms