Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PdgfbP31240 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.43□□□□□ -0.1
PdgfbP31240 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PdgfbP31240 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
PdgfbP31240 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.42□□□□□ -0.1
PdgfbP31240 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.42□□□□□ -0.1
PdgfbP31240 Mir3102-201ENSMUST00000175555 104 ntBASIC14.42□□□□□ -0.1
PdgfbP31240 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.42□□□□□ -0.1
PdgfbP31240 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PdgfbP31240 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.42□□□□□ -0.1
PdgfbP31240 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
PdgfbP31240 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
PdgfbP31240 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PdgfbP31240 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PdgfbP31240 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PdgfbP31240 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PdgfbP31240 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.41□□□□□ -0.1
PdgfbP31240 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PdgfbP31240 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdgfbP31240 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PdgfbP31240 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdgfbP31240 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PdgfbP31240 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PdgfbP31240 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PdgfbP31240 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.41□□□□□ -0.1
PdgfbP31240 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.41□□□□□ -0.1
PdgfbP31240 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.41□□□□□ -0.1
PdgfbP31240 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdgfbP31240 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdgfbP31240 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PdgfbP31240 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.41□□□□□ -0.1
PdgfbP31240 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.41□□□□□ -0.1
PdgfbP31240 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.41□□□□□ -0.1
PdgfbP31240 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdgfbP31240 Gm7399-201ENSMUST00000032395 858 ntBASIC14.41□□□□□ -0.1
PdgfbP31240 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdgfbP31240 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdgfbP31240 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PdgfbP31240 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdgfbP31240 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
PdgfbP31240 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdgfbP31240 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PdgfbP31240 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdgfbP31240 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
PdgfbP31240 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.4□□□□□ -0.1
PdgfbP31240 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdgfbP31240 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PdgfbP31240 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdgfbP31240 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdgfbP31240 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdgfbP31240 Gm15240-201ENSMUST00000118156 720 ntBASIC14.4□□□□□ -0.1
PdgfbP31240 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.4□□□□□ -0.1
PdgfbP31240 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.4□□□□□ -0.1
PdgfbP31240 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PdgfbP31240 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdgfbP31240 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.4□□□□□ -0.1
PdgfbP31240 Gm29649-201ENSMUST00000185649 419 ntBASIC14.4□□□□□ -0.1
PdgfbP31240 Gm43094-201ENSMUST00000196549 921 ntBASIC14.4□□□□□ -0.1
PdgfbP31240 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.4□□□□□ -0.1
PdgfbP31240 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdgfbP31240 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PdgfbP31240 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdgfbP31240 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
PdgfbP31240 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdgfbP31240 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
PdgfbP31240 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PdgfbP31240 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms