Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcam1P29533 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcam1P29533 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Vcam1P29533 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Vcam1P29533 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
Vcam1P29533 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vcam1P29533 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcam1P29533 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vcam1P29533 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Vcam1P29533 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcam1P29533 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.6■□□□□ 0.25
Vcam1P29533 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.6■□□□□ 0.25
Vcam1P29533 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcam1P29533 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcam1P29533 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcam1P29533 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vcam1P29533 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vcam1P29533 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.6■□□□□ 0.25
Vcam1P29533 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.6■□□□□ 0.25
Vcam1P29533 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.6■□□□□ 0.25
Vcam1P29533 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.6■□□□□ 0.25
Vcam1P29533 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.6■□□□□ 0.25
Vcam1P29533 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.6■□□□□ 0.25
Vcam1P29533 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.6■□□□□ 0.25
Vcam1P29533 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.6■□□□□ 0.25
Vcam1P29533 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcam1P29533 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcam1P29533 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcam1P29533 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcam1P29533 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.6■□□□□ 0.25
Vcam1P29533 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcam1P29533 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcam1P29533 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcam1P29533 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vcam1P29533 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Vcam1P29533 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Vcam1P29533 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
Vcam1P29533 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcam1P29533 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcam1P29533 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcam1P29533 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcam1P29533 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Vcam1P29533 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Vcam1P29533 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Vcam1P29533 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcam1P29533 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcam1P29533 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcam1P29533 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.59■□□□□ 0.25
Vcam1P29533 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.59■□□□□ 0.25
Vcam1P29533 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.59■□□□□ 0.25
Vcam1P29533 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vcam1P29533 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.59■□□□□ 0.25
Vcam1P29533 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcam1P29533 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcam1P29533 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.59■□□□□ 0.25
Vcam1P29533 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcam1P29533 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vcam1P29533 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.59■□□□□ 0.25
Vcam1P29533 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcam1P29533 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcam1P29533 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcam1P29533 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vcam1P29533 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vcam1P29533 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vcam1P29533 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vcam1P29533 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.59■□□□□ 0.25
Vcam1P29533 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.58■□□□□ 0.25
Vcam1P29533 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.58■□□□□ 0.25
Vcam1P29533 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vcam1P29533 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Vcam1P29533 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vcam1P29533 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.58■□□□□ 0.25
Vcam1P29533 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vcam1P29533 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vcam1P29533 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Vcam1P29533 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.58■□□□□ 0.24
Vcam1P29533 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vcam1P29533 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Vcam1P29533 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vcam1P29533 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vcam1P29533 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vcam1P29533 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.58■□□□□ 0.24
Vcam1P29533 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vcam1P29533 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vcam1P29533 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vcam1P29533 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vcam1P29533 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vcam1P29533 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vcam1P29533 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Vcam1P29533 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vcam1P29533 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vcam1P29533 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vcam1P29533 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vcam1P29533 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.58■□□□□ 0.24
Vcam1P29533 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcam1P29533 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcam1P29533 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Vcam1P29533 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcam1P29533 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vcam1P29533 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 112 ms