Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf1aP25118 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf1aP25118 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf1aP25118 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf1aP25118 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf1aP25118 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Tnfrsf1aP25118 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.18□□□□□ -0.46
Tnfrsf1aP25118 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tnfrsf1aP25118 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.18□□□□□ -0.46
Tnfrsf1aP25118 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Gm10154-201ENSMUST00000084445 354 ntBASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tnfrsf1aP25118 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Gm23547-201ENSMUST00000158210 271 ntBASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Tnfrsf1aP25118 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1aP25118 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Tnfrsf1aP25118 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Tnfrsf1aP25118 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1aP25118 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf1aP25118 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Tnfrsf1aP25118 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.15□□□□□ -0.46
Tnfrsf1aP25118 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms