Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.55□□□□□ -0.24
Clk1P22518 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.55□□□□□ -0.24
Clk1P22518 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.55□□□□□ -0.24
Clk1P22518 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Clk1P22518 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.55□□□□□ -0.24
Clk1P22518 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Clk1P22518 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clk1P22518 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Clk1P22518 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.54□□□□□ -0.24
Clk1P22518 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Clk1P22518 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.54□□□□□ -0.24
Clk1P22518 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Clk1P22518 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Clk1P22518 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.54□□□□□ -0.24
Clk1P22518 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.54□□□□□ -0.24
Clk1P22518 Gm18206-201ENSMUST00000207027 926 ntBASIC13.54□□□□□ -0.24
Clk1P22518 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.54□□□□□ -0.24
Clk1P22518 Gm5364-201ENSMUST00000216789 889 ntBASIC13.54□□□□□ -0.24
Clk1P22518 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.54□□□□□ -0.24
Clk1P22518 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.54□□□□□ -0.24
Clk1P22518 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Clk1P22518 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Clk1P22518 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Clk1P22518 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clk1P22518 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clk1P22518 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clk1P22518 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clk1P22518 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clk1P22518 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clk1P22518 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clk1P22518 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clk1P22518 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.53□□□□□ -0.24
Clk1P22518 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.53□□□□□ -0.24
Clk1P22518 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.53□□□□□ -0.24
Clk1P22518 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clk1P22518 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.53□□□□□ -0.24
Clk1P22518 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clk1P22518 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clk1P22518 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clk1P22518 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Clk1P22518 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clk1P22518 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clk1P22518 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clk1P22518 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clk1P22518 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clk1P22518 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.53□□□□□ -0.24
Clk1P22518 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clk1P22518 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clk1P22518 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clk1P22518 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clk1P22518 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Clk1P22518 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Clk1P22518 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clk1P22518 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Clk1P22518 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.52□□□□□ -0.24
Clk1P22518 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clk1P22518 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clk1P22518 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clk1P22518 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.52□□□□□ -0.25
Clk1P22518 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Clk1P22518 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clk1P22518 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.52□□□□□ -0.25
Clk1P22518 Gm27301-201ENSMUST00000184012 127 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms