Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.94□□□□□ -0.18
BdnfP21237 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
BdnfP21237 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BdnfP21237 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BdnfP21237 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.93□□□□□ -0.18
BdnfP21237 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BdnfP21237 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
BdnfP21237 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
BdnfP21237 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
BdnfP21237 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BdnfP21237 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
BdnfP21237 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BdnfP21237 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
BdnfP21237 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
BdnfP21237 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
BdnfP21237 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BdnfP21237 Gm13884-201ENSMUST00000118103 829 ntBASIC13.93□□□□□ -0.18
BdnfP21237 Gm11764-201ENSMUST00000120221 623 ntBASIC13.93□□□□□ -0.18
BdnfP21237 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.93□□□□□ -0.18
BdnfP21237 Gm18246-201ENSMUST00000221023 728 ntBASIC13.93□□□□□ -0.18
BdnfP21237 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.93□□□□□ -0.18
BdnfP21237 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.93□□□□□ -0.18
BdnfP21237 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BdnfP21237 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BdnfP21237 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
BdnfP21237 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
BdnfP21237 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
BdnfP21237 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
BdnfP21237 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
BdnfP21237 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.92□□□□□ -0.18
BdnfP21237 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
BdnfP21237 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
BdnfP21237 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
BdnfP21237 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.92□□□□□ -0.18
BdnfP21237 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
BdnfP21237 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.92□□□□□ -0.18
BdnfP21237 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.92□□□□□ -0.18
BdnfP21237 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
BdnfP21237 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
BdnfP21237 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.92□□□□□ -0.18
BdnfP21237 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.92□□□□□ -0.18
BdnfP21237 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
BdnfP21237 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.92□□□□□ -0.18
BdnfP21237 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.92□□□□□ -0.18
BdnfP21237 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
BdnfP21237 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BdnfP21237 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
BdnfP21237 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.92□□□□□ -0.18
BdnfP21237 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BdnfP21237 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BdnfP21237 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.91□□□□□ -0.18
BdnfP21237 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BdnfP21237 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.91□□□□□ -0.18
BdnfP21237 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.91□□□□□ -0.18
BdnfP21237 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
BdnfP21237 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
BdnfP21237 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
BdnfP21237 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BdnfP21237 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BdnfP21237 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BdnfP21237 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
BdnfP21237 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.91□□□□□ -0.18
BdnfP21237 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
BdnfP21237 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
BdnfP21237 Gm28659-201ENSMUST00000188013 759 ntBASIC13.91□□□□□ -0.18
BdnfP21237 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BdnfP21237 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
BdnfP21237 AV026068-213ENSMUST00000223675 1171 ntBASIC13.91□□□□□ -0.18
BdnfP21237 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BdnfP21237 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BdnfP21237 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
BdnfP21237 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
BdnfP21237 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
BdnfP21237 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.91□□□□□ -0.18
BdnfP21237 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BdnfP21237 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms