Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.82■□□□□ 0.12
Chmp6P0C0A3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp6P0C0A3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Gm27494-201ENSMUST00000184735 189 ntBASIC15.81■□□□□ 0.12
Chmp6P0C0A3 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Gm20553-201ENSMUST00000204205 844 ntBASIC15.81■□□□□ 0.12
Chmp6P0C0A3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp6P0C0A3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Gm11745-201ENSMUST00000121669 448 ntBASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Mir1895-201ENSMUST00000122615 79 ntBASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Chmp6P0C0A3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Gm23935-201ENSMUST00000102303 57 ntBASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Gm24270-201ENSMUST00000102326 57 ntBASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Gm24245-201ENSMUST00000157318 57 ntBASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp6P0C0A3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms