Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
CfdP03953 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
CfdP03953 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Gm25016-201ENSMUST00000158399 131 ntBASIC12.13□□□□□ -0.47
CfdP03953 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CfdP03953 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CfdP03953 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CfdP03953 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CfdP03953 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.12□□□□□ -0.47
CfdP03953 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.12□□□□□ -0.47
CfdP03953 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.12□□□□□ -0.47
CfdP03953 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CfdP03953 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CfdP03953 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CfdP03953 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.12□□□□□ -0.47
CfdP03953 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.12□□□□□ -0.47
CfdP03953 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.12□□□□□ -0.47
CfdP03953 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.12□□□□□ -0.47
CfdP03953 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
CfdP03953 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.12□□□□□ -0.47
CfdP03953 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CfdP03953 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CfdP03953 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.11□□□□□ -0.47
CfdP03953 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CfdP03953 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CfdP03953 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.11□□□□□ -0.47
CfdP03953 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.11□□□□□ -0.47
CfdP03953 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.11□□□□□ -0.47
CfdP03953 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CfdP03953 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.11□□□□□ -0.47
CfdP03953 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms