Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ClppO88696 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.22□□□□□ -0.13
ClppO88696 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ClppO88696 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
ClppO88696 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClppO88696 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ClppO88696 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClppO88696 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClppO88696 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClppO88696 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.21□□□□□ -0.13
ClppO88696 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClppO88696 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ClppO88696 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.21□□□□□ -0.13
ClppO88696 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClppO88696 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClppO88696 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClppO88696 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClppO88696 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.21□□□□□ -0.13
ClppO88696 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClppO88696 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
ClppO88696 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
ClppO88696 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ClppO88696 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.21□□□□□ -0.14
ClppO88696 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
ClppO88696 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.2□□□□□ -0.14
ClppO88696 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.2□□□□□ -0.14
ClppO88696 Gm6973-201ENSMUST00000117080 721 ntBASIC14.2□□□□□ -0.14
ClppO88696 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.2□□□□□ -0.14
ClppO88696 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
ClppO88696 Mir7023-201ENSMUST00000185093 64 ntBASIC14.2□□□□□ -0.14
ClppO88696 Gm7774-201ENSMUST00000200064 533 ntBASIC14.2□□□□□ -0.14
ClppO88696 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
ClppO88696 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ClppO88696 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.2□□□□□ -0.14
ClppO88696 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.2□□□□□ -0.14
ClppO88696 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.2□□□□□ -0.14
ClppO88696 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClppO88696 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClppO88696 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClppO88696 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClppO88696 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.19□□□□□ -0.14
ClppO88696 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClppO88696 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ClppO88696 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ClppO88696 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ClppO88696 Grk6-207ENSMUST00000225925 2769 ntBASIC14.19□□□□□ -0.14
ClppO88696 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
ClppO88696 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClppO88696 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClppO88696 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ClppO88696 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.19□□□□□ -0.14
ClppO88696 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClppO88696 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ClppO88696 Gm25948-201ENSMUST00000175334 112 ntBASIC14.19□□□□□ -0.14
ClppO88696 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.19□□□□□ -0.14
ClppO88696 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClppO88696 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClppO88696 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ClppO88696 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ClppO88696 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ClppO88696 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClppO88696 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
ClppO88696 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClppO88696 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClppO88696 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClppO88696 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClppO88696 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.18□□□□□ -0.14
ClppO88696 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClppO88696 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms