Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops6O88545 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cops6O88545 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops6O88545 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops6O88545 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC17.66■□□□□ 0.42
Cops6O88545 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.66■□□□□ 0.42
Cops6O88545 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.66■□□□□ 0.42
Cops6O88545 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.66■□□□□ 0.42
Cops6O88545 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops6O88545 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.66■□□□□ 0.42
Cops6O88545 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.66■□□□□ 0.42
Cops6O88545 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Cops6O88545 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops6O88545 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Cops6O88545 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.66■□□□□ 0.42
Cops6O88545 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cops6O88545 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops6O88545 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops6O88545 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops6O88545 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops6O88545 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.66■□□□□ 0.42
Cops6O88545 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops6O88545 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops6O88545 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops6O88545 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops6O88545 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Cops6O88545 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops6O88545 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops6O88545 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.66■□□□□ 0.42
Cops6O88545 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops6O88545 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops6O88545 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC17.66■□□□□ 0.42
Cops6O88545 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.66■□□□□ 0.42
Cops6O88545 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cops6O88545 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cops6O88545 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cops6O88545 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cops6O88545 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cops6O88545 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC17.65■□□□□ 0.42
Cops6O88545 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.65■□□□□ 0.42
Cops6O88545 Gm18018-201ENSMUST00000198273 408 ntBASIC17.65■□□□□ 0.42
Cops6O88545 Gm45668-201ENSMUST00000211271 493 ntBASIC17.65■□□□□ 0.42
Cops6O88545 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cops6O88545 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cops6O88545 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cops6O88545 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cops6O88545 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.65■□□□□ 0.42
Cops6O88545 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.65■□□□□ 0.42
Cops6O88545 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cops6O88545 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cops6O88545 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cops6O88545 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cops6O88545 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cops6O88545 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cops6O88545 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cops6O88545 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cops6O88545 Carlr-201ENSMUST00000181515 2574 ntBASIC17.64■□□□□ 0.41
Cops6O88545 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Cops6O88545 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.64■□□□□ 0.41
Cops6O88545 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cops6O88545 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Cops6O88545 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cops6O88545 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.64■□□□□ 0.41
Cops6O88545 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.64■□□□□ 0.41
Cops6O88545 Gm8515-201ENSMUST00000194852 576 ntBASIC17.64■□□□□ 0.41
Cops6O88545 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.64■□□□□ 0.41
Cops6O88545 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.64■□□□□ 0.41
Cops6O88545 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC17.64■□□□□ 0.41
Cops6O88545 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cops6O88545 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cops6O88545 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cops6O88545 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cops6O88545 Gm15823-201ENSMUST00000064305 670 ntBASIC17.64■□□□□ 0.41
Cops6O88545 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cops6O88545 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.64■□□□□ 0.41
Cops6O88545 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cops6O88545 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cops6O88545 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cops6O88545 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cops6O88545 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cops6O88545 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cops6O88545 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cops6O88545 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cops6O88545 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cops6O88545 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cops6O88545 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cops6O88545 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cops6O88545 Efs-202ENSMUST00000227037 2540 ntBASIC17.63■□□□□ 0.41
Cops6O88545 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.63■□□□□ 0.41
Cops6O88545 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cops6O88545 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cops6O88545 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cops6O88545 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cops6O88545 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cops6O88545 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cops6O88545 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
Cops6O88545 Gm15957-201ENSMUST00000118893 974 ntBASIC17.63■□□□□ 0.41
Cops6O88545 Gm12138-201ENSMUST00000122180 951 ntBASIC17.63■□□□□ 0.41
Cops6O88545 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Cops6O88545 Gm37917-201ENSMUST00000194711 392 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms