Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Rnf13O54965 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Rnf13O54965 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rnf13O54965 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Gm25990-201ENSMUST00000102440 86 ntBASIC13.17□□□□□ -0.3
Rnf13O54965 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rnf13O54965 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.17□□□□□ -0.3
Rnf13O54965 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.17□□□□□ -0.3
Rnf13O54965 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rnf13O54965 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.17□□□□□ -0.3
Rnf13O54965 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.17□□□□□ -0.3
Rnf13O54965 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.17□□□□□ -0.3
Rnf13O54965 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rnf13O54965 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rnf13O54965 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.16□□□□□ -0.3
Rnf13O54965 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rnf13O54965 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.16□□□□□ -0.3
Rnf13O54965 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rnf13O54965 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.16□□□□□ -0.3
Rnf13O54965 Gm7222-201ENSMUST00000117512 906 ntBASIC13.16□□□□□ -0.3
Rnf13O54965 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Rnf13O54965 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Rnf13O54965 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.16□□□□□ -0.3
Rnf13O54965 Gm28033-201ENSMUST00000184224 96 ntBASIC13.16□□□□□ -0.3
Rnf13O54965 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.16□□□□□ -0.3
Rnf13O54965 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.16□□□□□ -0.3
Rnf13O54965 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Rnf13O54965 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf13O54965 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rnf13O54965 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rnf13O54965 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf13O54965 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.15□□□□□ -0.3
Rnf13O54965 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf13O54965 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf13O54965 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Rnf13O54965 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf13O54965 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf13O54965 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf13O54965 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf13O54965 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.15□□□□□ -0.3
Rnf13O54965 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf13O54965 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf13O54965 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf13O54965 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf13O54965 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf13O54965 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.15□□□□□ -0.3
Rnf13O54965 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.15□□□□□ -0.3
Rnf13O54965 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.15□□□□□ -0.3
Rnf13O54965 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rnf13O54965 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.15□□□□□ -0.3
Rnf13O54965 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms