Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ptch2O35595 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptch2O35595 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptch2O35595 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptch2O35595 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.88□□□□□ -0.03
Ptch2O35595 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.88□□□□□ -0.03
Ptch2O35595 Gm29667-201ENSMUST00000190817 490 ntBASIC14.88□□□□□ -0.03
Ptch2O35595 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ptch2O35595 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.88□□□□□ -0.03
Ptch2O35595 Gm6218-201ENSMUST00000219812 628 ntBASIC14.88□□□□□ -0.03
Ptch2O35595 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ptch2O35595 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ptch2O35595 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ptch2O35595 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.88□□□□□ -0.03
Ptch2O35595 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptch2O35595 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ptch2O35595 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
Ptch2O35595 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ptch2O35595 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptch2O35595 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptch2O35595 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptch2O35595 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ptch2O35595 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptch2O35595 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptch2O35595 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ptch2O35595 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ptch2O35595 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.87□□□□□ -0.03
Ptch2O35595 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.87□□□□□ -0.03
Ptch2O35595 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Ptch2O35595 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptch2O35595 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.87□□□□□ -0.03
Ptch2O35595 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ptch2O35595 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptch2O35595 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptch2O35595 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ptch2O35595 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Ptch2O35595 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.87□□□□□ -0.03
Ptch2O35595 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Ptch2O35595 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ptch2O35595 Gm27631-201ENSMUST00000184163 466 ntBASIC14.87□□□□□ -0.03
Ptch2O35595 Dupd1-202ENSMUST00000224735 548 ntBASIC14.87□□□□□ -0.03
Ptch2O35595 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptch2O35595 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptch2O35595 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ptch2O35595 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
Ptch2O35595 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptch2O35595 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ptch2O35595 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ptch2O35595 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptch2O35595 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Ptch2O35595 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptch2O35595 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptch2O35595 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptch2O35595 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptch2O35595 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptch2O35595 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptch2O35595 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptch2O35595 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptch2O35595 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptch2O35595 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ptch2O35595 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptch2O35595 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptch2O35595 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptch2O35595 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptch2O35595 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ptch2O35595 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptch2O35595 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Ptch2O35595 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptch2O35595 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.86□□□□□ -0.03
Ptch2O35595 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.86□□□□□ -0.03
Ptch2O35595 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.86□□□□□ -0.03
Ptch2O35595 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.86□□□□□ -0.03
Ptch2O35595 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptch2O35595 Gm46209-201ENSMUST00000217912 553 ntBASIC14.86□□□□□ -0.03
Ptch2O35595 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptch2O35595 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ptch2O35595 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptch2O35595 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptch2O35595 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptch2O35595 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Ptch2O35595 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptch2O35595 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ptch2O35595 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ptch2O35595 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ptch2O35595 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptch2O35595 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ptch2O35595 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptch2O35595 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Ptch2O35595 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptch2O35595 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptch2O35595 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ptch2O35595 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.85□□□□□ -0.03
Ptch2O35595 Gm8749-201ENSMUST00000117737 331 ntBASIC14.85□□□□□ -0.03
Ptch2O35595 Gm4875-201ENSMUST00000118257 786 ntBASIC14.85□□□□□ -0.03
Ptch2O35595 Gm6222-201ENSMUST00000120787 396 ntBASIC14.85□□□□□ -0.03
Ptch2O35595 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ptch2O35595 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.85□□□□□ -0.03
Ptch2O35595 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ptch2O35595 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptch2O35595 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms