Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Polr1aO35134 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC21.95■■□□□ 1.1
Polr1aO35134 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Polr1aO35134 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Polr1aO35134 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Polr1aO35134 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Polr1aO35134 Gm4081-201ENSMUST00000195287 1838 ntBASIC21.95■■□□□ 1.1
Polr1aO35134 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Polr1aO35134 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Polr1aO35134 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Polr1aO35134 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Polr1aO35134 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC21.94■■□□□ 1.1
Polr1aO35134 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC21.94■■□□□ 1.1
Polr1aO35134 Gm45841-201ENSMUST00000207700 164 ntBASIC21.94■■□□□ 1.1
Polr1aO35134 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Polr1aO35134 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Polr1aO35134 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Polr1aO35134 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Polr1aO35134 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC21.94■■□□□ 1.1
Polr1aO35134 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Polr1aO35134 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
Polr1aO35134 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Polr1aO35134 Gm45630-201ENSMUST00000210243 1911 ntBASIC21.94■■□□□ 1.1
Polr1aO35134 AC115735.4-201ENSMUST00000227460 1944 ntBASIC21.94■■□□□ 1.1
Polr1aO35134 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
Polr1aO35134 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Polr1aO35134 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Polr1aO35134 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC21.94■■□□□ 1.1
Polr1aO35134 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC21.94■■□□□ 1.1
Polr1aO35134 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC21.94■■□□□ 1.1
Polr1aO35134 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
Polr1aO35134 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Polr1aO35134 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Polr1aO35134 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC21.94■■□□□ 1.1
Polr1aO35134 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Polr1aO35134 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Polr1aO35134 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Polr1aO35134 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Polr1aO35134 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Polr1aO35134 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Polr1aO35134 Gm43548-201ENSMUST00000197139 2353 ntBASIC21.93■■□□□ 1.1
Polr1aO35134 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Polr1aO35134 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Polr1aO35134 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Polr1aO35134 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC21.93■■□□□ 1.1
Polr1aO35134 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC21.93■■□□□ 1.1
Polr1aO35134 Gm7553-201ENSMUST00000185805 1426 ntBASIC21.93■■□□□ 1.1
Polr1aO35134 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Polr1aO35134 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Polr1aO35134 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Polr1aO35134 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Polr1aO35134 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Polr1aO35134 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC21.92■■□□□ 1.1
Polr1aO35134 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Polr1aO35134 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Polr1aO35134 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Polr1aO35134 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Polr1aO35134 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC21.92■■□□□ 1.1
Polr1aO35134 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC21.92■■□□□ 1.1
Polr1aO35134 Mir1247-201ENSMUST00000116706 82 ntBASIC21.92■■□□□ 1.1
Polr1aO35134 Gm15198-201ENSMUST00000117283 177 ntBASIC21.92■■□□□ 1.1
Polr1aO35134 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC21.92■■□□□ 1.1
Polr1aO35134 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC21.92■■□□□ 1.1
Polr1aO35134 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Polr1aO35134 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC21.92■■□□□ 1.1
Polr1aO35134 Gm3809-201ENSMUST00000180973 1006 ntBASIC21.92■■□□□ 1.1
Polr1aO35134 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Polr1aO35134 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Polr1aO35134 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Polr1aO35134 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Polr1aO35134 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Polr1aO35134 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Polr1aO35134 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Polr1aO35134 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Polr1aO35134 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC21.91■■□□□ 1.1
Polr1aO35134 AC126253.1-201ENSMUST00000227974 824 ntBASIC21.91■■□□□ 1.1
Polr1aO35134 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Polr1aO35134 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Polr1aO35134 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Polr1aO35134 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Polr1aO35134 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Polr1aO35134 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
Polr1aO35134 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC21.91■■□□□ 1.1
Polr1aO35134 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Polr1aO35134 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Polr1aO35134 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Polr1aO35134 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Polr1aO35134 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Polr1aO35134 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Polr1aO35134 Zscan30-202ENSMUST00000224144 1458 ntBASIC21.9■■□□□ 1.1
Polr1aO35134 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Polr1aO35134 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Polr1aO35134 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC21.9■■□□□ 1.1
Polr1aO35134 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Polr1aO35134 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC21.9■■□□□ 1.1
Polr1aO35134 Gm27847-201ENSMUST00000183711 107 ntBASIC21.9■■□□□ 1.1
Polr1aO35134 Gm27375-201ENSMUST00000183799 107 ntBASIC21.9■■□□□ 1.1
Polr1aO35134 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC21.9■■□□□ 1.1
Polr1aO35134 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Polr1aO35134 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms