Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ebf3O08791 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ebf3O08791 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.08■□□□□ 0
Ebf3O08791 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ebf3O08791 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ebf3O08791 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.08■□□□□ 0
Ebf3O08791 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ebf3O08791 Gm43767-201ENSMUST00000198933 381 ntBASIC15.08■□□□□ 0
Ebf3O08791 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.08■□□□□ 0
Ebf3O08791 Gm9063-201ENSMUST00000223299 582 ntBASIC15.08■□□□□ 0
Ebf3O08791 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ebf3O08791 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Ebf3O08791 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ebf3O08791 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ebf3O08791 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ebf3O08791 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ebf3O08791 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ebf3O08791 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.08■□□□□ 0
Ebf3O08791 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ebf3O08791 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ebf3O08791 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ebf3O08791 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Celf4-206ENSMUST00000224553 1729 ntBASIC15.07■□□□□ 0
Ebf3O08791 Gm15487-201ENSMUST00000122373 465 ntBASIC15.07■□□□□ 0
Ebf3O08791 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ebf3O08791 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.07■□□□□ 0
Ebf3O08791 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ebf3O08791 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ebf3O08791 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.07■□□□□ 0
Ebf3O08791 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.07■□□□□ 0
Ebf3O08791 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Ebf3O08791 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ebf3O08791 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Ebf3O08791 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ebf3O08791 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Efs-202ENSMUST00000227037 2540 ntBASIC15.06■□□□□ 0
Ebf3O08791 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Ebf3O08791 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.06■□□□□ 0
Ebf3O08791 Gm13823-201ENSMUST00000119930 345 ntBASIC15.06■□□□□ 0
Ebf3O08791 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.06■□□□□ 0
Ebf3O08791 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ebf3O08791 Gm27533-201ENSMUST00000183800 152 ntBASIC15.06■□□□□ 0
Ebf3O08791 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ebf3O08791 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ebf3O08791 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.06■□□□□ 0
Ebf3O08791 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.06■□□□□ 0
Ebf3O08791 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.06■□□□□ 0
Ebf3O08791 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ebf3O08791 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ebf3O08791 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ebf3O08791 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ 0
Ebf3O08791 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ebf3O08791 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ebf3O08791 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ebf3O08791 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms