Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Gm37015-201ENSMUST00000192763 1521 ntBASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Gm37728-201ENSMUST00000195025 2292 ntBASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Gm12390-201ENSMUST00000117897 397 ntBASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Gm43094-201ENSMUST00000196549 921 ntBASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Pcf11G3X9Z4 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcf11G3X9Z4 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcf11G3X9Z4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcf11G3X9Z4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcf11G3X9Z4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Pcf11G3X9Z4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcf11G3X9Z4 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcf11G3X9Z4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC21.64■■□□□ 1.05
Pcf11G3X9Z4 Gm2445-201ENSMUST00000182798 989 ntBASIC21.64■■□□□ 1.05
Pcf11G3X9Z4 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC21.64■■□□□ 1.05
Pcf11G3X9Z4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC21.64■■□□□ 1.05
Pcf11G3X9Z4 AC110817.1-201ENSMUST00000225706 605 ntBASIC21.64■■□□□ 1.05
Pcf11G3X9Z4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pcf11G3X9Z4 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcf11G3X9Z4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
Pcf11G3X9Z4 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcf11G3X9Z4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Pcf11G3X9Z4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcf11G3X9Z4 Gm6244-201ENSMUST00000178732 841 ntBASIC21.63■■□□□ 1.05
Pcf11G3X9Z4 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcf11G3X9Z4 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcf11G3X9Z4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcf11G3X9Z4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC21.63■■□□□ 1.05
Pcf11G3X9Z4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcf11G3X9Z4 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcf11G3X9Z4 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcf11G3X9Z4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcf11G3X9Z4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Pcf11G3X9Z4 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC21.62■■□□□ 1.05
Pcf11G3X9Z4 Gm15429-201ENSMUST00000151268 798 ntBASIC21.62■■□□□ 1.05
Pcf11G3X9Z4 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcf11G3X9Z4 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC21.62■■□□□ 1.05
Pcf11G3X9Z4 AC125117.1-201ENSMUST00000228121 468 ntBASIC21.62■■□□□ 1.05
Pcf11G3X9Z4 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Pcf11G3X9Z4 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcf11G3X9Z4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Pcf11G3X9Z4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Pcf11G3X9Z4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcf11G3X9Z4 Gm44645-201ENSMUST00000205492 1653 ntBASIC21.62■■□□□ 1.05
Pcf11G3X9Z4 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcf11G3X9Z4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcf11G3X9Z4 Gm37812-201ENSMUST00000195216 2475 ntBASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Mir692-1-201ENSMUST00000102263 109 ntBASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Gm12485-201ENSMUST00000119641 291 ntBASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 AC192088.1-201ENSMUST00000227561 301 ntBASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Gm24196-201ENSMUST00000179161 110 ntBASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Gm6159-201ENSMUST00000191249 1724 ntBASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 AY702102-202ENSMUST00000194651 1173 ntBASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Pcf11G3X9Z4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Gm11557-201ENSMUST00000120200 1008 ntBASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Pcf11G3X9Z4 Gm8927-201ENSMUST00000181978 981 ntBASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms