Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.61□□□□□ -0.23
Colca2F8VPY8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Colca2F8VPY8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.61□□□□□ -0.23
Colca2F8VPY8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.6□□□□□ -0.23
Colca2F8VPY8 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Gm44397-201ENSMUST00000195950 113 ntBASIC13.6□□□□□ -0.23
Colca2F8VPY8 Gm43818-201ENSMUST00000200605 466 ntBASIC13.6□□□□□ -0.23
Colca2F8VPY8 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Gm18054-201ENSMUST00000207539 555 ntBASIC13.6□□□□□ -0.23
Colca2F8VPY8 Gm6013-201ENSMUST00000212264 699 ntBASIC13.6□□□□□ -0.23
Colca2F8VPY8 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Colca2F8VPY8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.59□□□□□ -0.23
Colca2F8VPY8 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.59□□□□□ -0.23
Colca2F8VPY8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Colca2F8VPY8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Colca2F8VPY8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Colca2F8VPY8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Colca2F8VPY8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms