Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pcdhb9E9Q5G2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Gm27680-201ENSMUST00000184192 160 ntBASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 AA619741-201ENSMUST00000195095 646 ntBASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb9E9Q5G2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Gm14767-201ENSMUST00000121559 586 ntBASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Gm12882-201ENSMUST00000121696 517 ntBASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Gm9063-201ENSMUST00000223299 582 ntBASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb9E9Q5G2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb9E9Q5G2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhb9E9Q5G2 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb9E9Q5G2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhb9E9Q5G2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb9E9Q5G2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb9E9Q5G2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb9E9Q5G2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms