Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Mir5126-201ENSMUST00000175513 77 ntBASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Gm5864-201ENSMUST00000202263 970 ntBASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Gm45747-201ENSMUST00000212203 999 ntBASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Gm42471-201ENSMUST00000201457 1865 ntBASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gm5878E9PUB3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Gm9449-201ENSMUST00000207265 1011 ntBASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Gm5878E9PUB3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Gm13884-201ENSMUST00000118103 829 ntBASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Gm16198-201ENSMUST00000118766 670 ntBASIC10.93□□□□□ -0.66
Gm5878E9PUB3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Mir7036b-201ENSMUST00000184791 63 ntBASIC10.93□□□□□ -0.66
Gm5878E9PUB3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm5878E9PUB3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms