Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scn7aB1AYL1 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Gm45784-201ENSMUST00000188360 142 ntBASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Scn7aB1AYL1 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Gm17420-201ENSMUST00000164753 153 ntBASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scn7aB1AYL1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC18.35■□□□□ 0.53
Scn7aB1AYL1 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn7aB1AYL1 Gm16342-201ENSMUST00000124025 1025 ntBASIC18.35■□□□□ 0.53
Scn7aB1AYL1 Gm29127-201ENSMUST00000188304 517 ntBASIC18.35■□□□□ 0.53
Scn7aB1AYL1 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn7aB1AYL1 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn7aB1AYL1 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn7aB1AYL1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scn7aB1AYL1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn7aB1AYL1 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Scn7aB1AYL1 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn7aB1AYL1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.35■□□□□ 0.53
Scn7aB1AYL1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn7aB1AYL1 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC18.35■□□□□ 0.53
Scn7aB1AYL1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Scn7aB1AYL1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn7aB1AYL1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn7aB1AYL1 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn7aB1AYL1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn7aB1AYL1 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn7aB1AYL1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scn7aB1AYL1 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC18.35■□□□□ 0.53
Scn7aB1AYL1 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn7aB1AYL1 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Scn7aB1AYL1 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn7aB1AYL1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Scn7aB1AYL1 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Scn7aB1AYL1 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC18.34■□□□□ 0.53
Scn7aB1AYL1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn7aB1AYL1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn7aB1AYL1 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn7aB1AYL1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn7aB1AYL1 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn7aB1AYL1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn7aB1AYL1 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC18.34■□□□□ 0.53
Scn7aB1AYL1 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn7aB1AYL1 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
Scn7aB1AYL1 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn7aB1AYL1 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn7aB1AYL1 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC18.34■□□□□ 0.53
Scn7aB1AYL1 Gm45331-201ENSMUST00000209868 554 ntBASIC18.34■□□□□ 0.53
Scn7aB1AYL1 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn7aB1AYL1 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn7aB1AYL1 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn7aB1AYL1 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn7aB1AYL1 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Scn7aB1AYL1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn7aB1AYL1 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Scn7aB1AYL1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn7aB1AYL1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms