Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Gm9726-201ENSMUST00000180321 678 ntBASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Trav6-5A0A075B6B5 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Gm15794-201ENSMUST00000120182 631 ntBASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Gm25745-201ENSMUST00000174945 133 ntBASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav6-5A0A075B6B5 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Gm11950-201ENSMUST00000121615 838 ntBASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Gm43799-201ENSMUST00000201845 579 ntBASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav6-5A0A075B6B5 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav6-5A0A075B6B5 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.21□□□□□ -0.62
Trav6-5A0A075B6B5 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.21□□□□□ -0.62
Trav6-5A0A075B6B5 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.21□□□□□ -0.62
Trav6-5A0A075B6B5 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav6-5A0A075B6B5 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav6-5A0A075B6B5 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.21□□□□□ -0.62
Trav6-5A0A075B6B5 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms