Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CcsQ9WU84 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CcsQ9WU84 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CcsQ9WU84 Gm12644-201ENSMUST00000119935 606 ntBASIC11.33□□□□□ -0.6
CcsQ9WU84 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.33□□□□□ -0.6
CcsQ9WU84 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CcsQ9WU84 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.33□□□□□ -0.6
CcsQ9WU84 Gm43347-201ENSMUST00000200226 580 ntBASIC11.33□□□□□ -0.6
CcsQ9WU84 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CcsQ9WU84 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CcsQ9WU84 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.33□□□□□ -0.6
CcsQ9WU84 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
CcsQ9WU84 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
CcsQ9WU84 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
CcsQ9WU84 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CcsQ9WU84 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.33□□□□□ -0.6
CcsQ9WU84 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CcsQ9WU84 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CcsQ9WU84 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CcsQ9WU84 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CcsQ9WU84 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11.33□□□□□ -0.6
CcsQ9WU84 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.33□□□□□ -0.6
CcsQ9WU84 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CcsQ9WU84 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CcsQ9WU84 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
CcsQ9WU84 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CcsQ9WU84 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CcsQ9WU84 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CcsQ9WU84 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CcsQ9WU84 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.33□□□□□ -0.6
CcsQ9WU84 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
CcsQ9WU84 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CcsQ9WU84 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.33□□□□□ -0.6
CcsQ9WU84 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CcsQ9WU84 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.32□□□□□ -0.6
CcsQ9WU84 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
CcsQ9WU84 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
CcsQ9WU84 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
CcsQ9WU84 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
CcsQ9WU84 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.32□□□□□ -0.6
CcsQ9WU84 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.32□□□□□ -0.6
CcsQ9WU84 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.32□□□□□ -0.6
CcsQ9WU84 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
CcsQ9WU84 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
CcsQ9WU84 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.32□□□□□ -0.6
CcsQ9WU84 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
CcsQ9WU84 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
CcsQ9WU84 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
CcsQ9WU84 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CcsQ9WU84 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CcsQ9WU84 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CcsQ9WU84 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CcsQ9WU84 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CcsQ9WU84 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.31□□□□□ -0.6
CcsQ9WU84 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
CcsQ9WU84 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
CcsQ9WU84 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.31□□□□□ -0.6
CcsQ9WU84 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CcsQ9WU84 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
CcsQ9WU84 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.31□□□□□ -0.6
CcsQ9WU84 Gm28659-201ENSMUST00000188013 759 ntBASIC11.31□□□□□ -0.6
CcsQ9WU84 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.31□□□□□ -0.6
CcsQ9WU84 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.31□□□□□ -0.6
CcsQ9WU84 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CcsQ9WU84 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms