Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgn5Q9JL35 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgn5Q9JL35 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgn5Q9JL35 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.35■□□□□ 0.21
Hmgn5Q9JL35 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Hmgn5Q9JL35 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Hmgn5Q9JL35 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgn5Q9JL35 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgn5Q9JL35 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
Hmgn5Q9JL35 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Hmgn5Q9JL35 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hmgn5Q9JL35 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn5Q9JL35 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn5Q9JL35 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn5Q9JL35 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn5Q9JL35 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn5Q9JL35 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Hmgn5Q9JL35 Gm18489-201ENSMUST00000172565 551 ntBASIC16.34■□□□□ 0.21
Hmgn5Q9JL35 Gm9726-201ENSMUST00000180321 678 ntBASIC16.34■□□□□ 0.21
Hmgn5Q9JL35 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.34■□□□□ 0.21
Hmgn5Q9JL35 Gm6296-201ENSMUST00000222599 943 ntBASIC16.34■□□□□ 0.21
Hmgn5Q9JL35 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn5Q9JL35 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn5Q9JL35 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn5Q9JL35 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn5Q9JL35 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn5Q9JL35 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Hmgn5Q9JL35 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Hmgn5Q9JL35 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn5Q9JL35 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.34■□□□□ 0.21
Hmgn5Q9JL35 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Hmgn5Q9JL35 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgn5Q9JL35 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmgn5Q9JL35 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.33■□□□□ 0.21
Hmgn5Q9JL35 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmgn5Q9JL35 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Hmgn5Q9JL35 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmgn5Q9JL35 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmgn5Q9JL35 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmgn5Q9JL35 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
Hmgn5Q9JL35 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn5Q9JL35 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn5Q9JL35 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.33■□□□□ 0.2
Hmgn5Q9JL35 Gm15372-201ENSMUST00000120729 834 ntBASIC16.33■□□□□ 0.2
Hmgn5Q9JL35 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn5Q9JL35 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Hmgn5Q9JL35 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn5Q9JL35 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Hmgn5Q9JL35 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn5Q9JL35 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn5Q9JL35 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Hmgn5Q9JL35 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn5Q9JL35 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn5Q9JL35 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn5Q9JL35 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn5Q9JL35 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn5Q9JL35 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.33■□□□□ 0.2
Hmgn5Q9JL35 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.33■□□□□ 0.2
Hmgn5Q9JL35 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn5Q9JL35 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgn5Q9JL35 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgn5Q9JL35 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.31■□□□□ 0.2
Hmgn5Q9JL35 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms