Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3bQ9ES34 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3bQ9ES34 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3bQ9ES34 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3bQ9ES34 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ube3bQ9ES34 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Gm14057-201ENSMUST00000120631 482 ntBASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ube3bQ9ES34 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Gm43703-201ENSMUST00000200523 763 ntBASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.23■□□□□ 0.35
Ube3bQ9ES34 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.23■□□□□ 0.35
Ube3bQ9ES34 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.22■□□□□ 0.35
Ube3bQ9ES34 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.22■□□□□ 0.35
Ube3bQ9ES34 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms