Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf1Q9EPU4 AC159196.2-201ENSMUST00000224082 1622 ntBASIC19.87■□□□□ 0.77
Cpsf1Q9EPU4 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf1Q9EPU4 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC19.87■□□□□ 0.77
Cpsf1Q9EPU4 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf1Q9EPU4 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpsf1Q9EPU4 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cpsf1Q9EPU4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf1Q9EPU4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf1Q9EPU4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf1Q9EPU4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Cpsf1Q9EPU4 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf1Q9EPU4 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf1Q9EPU4 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cpsf1Q9EPU4 Gm45668-201ENSMUST00000211271 493 ntBASIC19.86■□□□□ 0.77
Cpsf1Q9EPU4 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cpsf1Q9EPU4 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf1Q9EPU4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cpsf1Q9EPU4 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cpsf1Q9EPU4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf1Q9EPU4 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cpsf1Q9EPU4 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf1Q9EPU4 AC126549.2-201ENSMUST00000223997 1976 ntBASIC19.86■□□□□ 0.77
Cpsf1Q9EPU4 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf1Q9EPU4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cpsf1Q9EPU4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf1Q9EPU4 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpsf1Q9EPU4 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Ldb3-207ENSMUST00000227819 1499 ntBASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Gm37411-201ENSMUST00000194180 2282 ntBASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Gm6283-201ENSMUST00000182369 1000 ntBASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 AC131690.1-201ENSMUST00000218406 374 ntBASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 AC130829.1-201ENSMUST00000221548 494 ntBASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 AC154239.3-201ENSMUST00000226933 674 ntBASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Gm6180-201ENSMUST00000065243 498 ntBASIC19.85■□□□□ 0.77
Cpsf1Q9EPU4 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf1Q9EPU4 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Cpsf1Q9EPU4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf1Q9EPU4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC19.84■□□□□ 0.77
Cpsf1Q9EPU4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf1Q9EPU4 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf1Q9EPU4 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf1Q9EPU4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cpsf1Q9EPU4 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf1Q9EPU4 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf1Q9EPU4 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpsf1Q9EPU4 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Cpsf1Q9EPU4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC19.84■□□□□ 0.77
Cpsf1Q9EPU4 Gm5425-201ENSMUST00000214125 459 ntBASIC19.84■□□□□ 0.77
Cpsf1Q9EPU4 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC19.84■□□□□ 0.77
Cpsf1Q9EPU4 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC19.84■□□□□ 0.77
Cpsf1Q9EPU4 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Cpsf1Q9EPU4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cpsf1Q9EPU4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpsf1Q9EPU4 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpsf1Q9EPU4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpsf1Q9EPU4 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpsf1Q9EPU4 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpsf1Q9EPU4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Cpsf1Q9EPU4 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cpsf1Q9EPU4 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC19.83■□□□□ 0.76
Cpsf1Q9EPU4 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC19.83■□□□□ 0.76
Cpsf1Q9EPU4 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cpsf1Q9EPU4 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cpsf1Q9EPU4 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cpsf1Q9EPU4 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC19.83■□□□□ 0.76
Cpsf1Q9EPU4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cpsf1Q9EPU4 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cpsf1Q9EPU4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Cpsf1Q9EPU4 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf1Q9EPU4 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cpsf1Q9EPU4 Gm14928-201ENSMUST00000120198 477 ntBASIC19.82■□□□□ 0.76
Cpsf1Q9EPU4 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf1Q9EPU4 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf1Q9EPU4 Gm28631-201ENSMUST00000190740 334 ntBASIC19.82■□□□□ 0.76
Cpsf1Q9EPU4 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms