Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc3Q9CW03 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.12■□□□□ 0.33
Smc3Q9CW03 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smc3Q9CW03 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smc3Q9CW03 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC17.11■□□□□ 0.33
Smc3Q9CW03 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.11■□□□□ 0.33
Smc3Q9CW03 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.11■□□□□ 0.33
Smc3Q9CW03 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smc3Q9CW03 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Smc3Q9CW03 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc3Q9CW03 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smc3Q9CW03 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc3Q9CW03 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc3Q9CW03 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc3Q9CW03 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.09■□□□□ 0.33
Smc3Q9CW03 Mir5131-201ENSMUST00000175426 93 ntBASIC17.09■□□□□ 0.33
Smc3Q9CW03 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.09■□□□□ 0.33
Smc3Q9CW03 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.09■□□□□ 0.33
Smc3Q9CW03 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc3Q9CW03 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.09■□□□□ 0.33
Smc3Q9CW03 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.09■□□□□ 0.33
Smc3Q9CW03 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.09■□□□□ 0.33
Smc3Q9CW03 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc3Q9CW03 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc3Q9CW03 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc3Q9CW03 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc3Q9CW03 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc3Q9CW03 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc3Q9CW03 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Smc3Q9CW03 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smc3Q9CW03 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smc3Q9CW03 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smc3Q9CW03 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smc3Q9CW03 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smc3Q9CW03 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smc3Q9CW03 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC17.08■□□□□ 0.33
Smc3Q9CW03 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms