Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Otud1Q9CUB6 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Otud1Q9CUB6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Gm27622-201ENSMUST00000183779 60 ntBASIC13.75□□□□□ -0.21
Otud1Q9CUB6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Gm20949-201ENSMUST00000206478 952 ntBASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.75□□□□□ -0.21
Otud1Q9CUB6 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.75□□□□□ -0.21
Otud1Q9CUB6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Gm28630-201ENSMUST00000187806 498 ntBASIC13.74□□□□□ -0.21
Otud1Q9CUB6 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Otud1Q9CUB6 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.73□□□□□ -0.21
Otud1Q9CUB6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms