Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.08□□□□□ -0.16
Cstf3Q99LI7 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Gm16026-204ENSMUST00000162652 683 ntBASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Gm18733-201ENSMUST00000173950 856 ntBASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Gm10154-201ENSMUST00000084445 354 ntBASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cstf3Q99LI7 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Thap2-203ENSMUST00000218989 527 ntBASIC14.06□□□□□ -0.16
Cstf3Q99LI7 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Mzt1-203ENSMUST00000227948 952 ntBASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Cstf3Q99LI7 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Gm16198-201ENSMUST00000118766 670 ntBASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Gm14140-201ENSMUST00000119999 995 ntBASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Gm2451-201ENSMUST00000199447 999 ntBASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Gm10290-201ENSMUST00000200451 999 ntBASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cstf3Q99LI7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms