Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb6Q91XZ4 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Gm2810-201ENSMUST00000118681 990 ntBASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb6Q91XZ4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Gm11745-201ENSMUST00000121669 448 ntBASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhb6Q91XZ4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Pcdhb6Q91XZ4 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms