Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Mir706-201ENSMUST00000102262 84 ntBASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Gm28455-201ENSMUST00000189105 1290 ntBASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Gm18057-201ENSMUST00000208220 503 ntBASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb17Q91VD8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.27■□□□□ 0.04
Pcdhb17Q91VD8 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.27■□□□□ 0.04
Pcdhb17Q91VD8 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.27■□□□□ 0.04
Pcdhb17Q91VD8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb17Q91VD8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb17Q91VD8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb17Q91VD8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb17Q91VD8 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.27■□□□□ 0.04
Pcdhb17Q91VD8 Gm2451-201ENSMUST00000199447 999 ntBASIC15.27■□□□□ 0.04
Pcdhb17Q91VD8 Gm10290-201ENSMUST00000200451 999 ntBASIC15.27■□□□□ 0.04
Pcdhb17Q91VD8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb17Q91VD8 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb17Q91VD8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdhb17Q91VD8 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb17Q91VD8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb17Q91VD8 AC154730.1-201ENSMUST00000227874 816 ntBASIC15.27■□□□□ 0.04
Pcdhb17Q91VD8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Pcdhb17Q91VD8 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb17Q91VD8 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.27■□□□□ 0.04
Pcdhb17Q91VD8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb17Q91VD8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb17Q91VD8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb17Q91VD8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb17Q91VD8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb17Q91VD8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Pcdhb17Q91VD8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb17Q91VD8 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb17Q91VD8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb17Q91VD8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb17Q91VD8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb17Q91VD8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb17Q91VD8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Timm21-201ENSMUST00000025547 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Rprl2-201ENSMUST00000157150 290 ntBASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Gm22588-201ENSMUST00000157510 140 ntBASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Gm37866-201ENSMUST00000191950 696 ntBASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Chchd1-203ENSMUST00000224633 557 ntBASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb17Q91VD8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms