Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Mir6990-201ENSMUST00000183724 91 ntBASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Gm9182-201ENSMUST00000217829 639 ntBASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb11Q91UZ8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Gm44335-201ENSMUST00000196879 141 ntBASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Gm44297-201ENSMUST00000198304 141 ntBASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Gm44346-201ENSMUST00000198851 141 ntBASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb11Q91UZ8 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Gm23547-201ENSMUST00000158210 271 ntBASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb11Q91UZ8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb11Q91UZ8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb11Q91UZ8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb11Q91UZ8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb11Q91UZ8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb11Q91UZ8 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb11Q91UZ8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb11Q91UZ8 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb11Q91UZ8 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms