Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
StrcQ8VIM6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
StrcQ8VIM6 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
StrcQ8VIM6 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
StrcQ8VIM6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
StrcQ8VIM6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
StrcQ8VIM6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
StrcQ8VIM6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
StrcQ8VIM6 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
StrcQ8VIM6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
StrcQ8VIM6 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
StrcQ8VIM6 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
StrcQ8VIM6 Gm12749-201ENSMUST00000122138 1159 ntBASIC16.96■□□□□ 0.3
StrcQ8VIM6 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
StrcQ8VIM6 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
StrcQ8VIM6 Gm37008-201ENSMUST00000195712 319 ntBASIC16.96■□□□□ 0.3
StrcQ8VIM6 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC16.96■□□□□ 0.3
StrcQ8VIM6 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
StrcQ8VIM6 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
StrcQ8VIM6 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
StrcQ8VIM6 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
StrcQ8VIM6 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
StrcQ8VIM6 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
StrcQ8VIM6 Snora73a-201ENSMUST00000082453 205 ntBASIC16.96■□□□□ 0.3
StrcQ8VIM6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
StrcQ8VIM6 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
StrcQ8VIM6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.95■□□□□ 0.3
StrcQ8VIM6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
StrcQ8VIM6 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
StrcQ8VIM6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
StrcQ8VIM6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
StrcQ8VIM6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.95■□□□□ 0.3
StrcQ8VIM6 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
StrcQ8VIM6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
StrcQ8VIM6 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
StrcQ8VIM6 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
StrcQ8VIM6 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC16.95■□□□□ 0.3
StrcQ8VIM6 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.95■□□□□ 0.3
StrcQ8VIM6 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.95■□□□□ 0.3
StrcQ8VIM6 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.95■□□□□ 0.3
StrcQ8VIM6 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.95■□□□□ 0.3
StrcQ8VIM6 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
StrcQ8VIM6 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
StrcQ8VIM6 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
StrcQ8VIM6 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
StrcQ8VIM6 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
StrcQ8VIM6 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
StrcQ8VIM6 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
StrcQ8VIM6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
StrcQ8VIM6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
StrcQ8VIM6 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
StrcQ8VIM6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
StrcQ8VIM6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
StrcQ8VIM6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
StrcQ8VIM6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
StrcQ8VIM6 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
StrcQ8VIM6 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
StrcQ8VIM6 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC16.94■□□□□ 0.3
StrcQ8VIM6 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.94■□□□□ 0.3
StrcQ8VIM6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
StrcQ8VIM6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
StrcQ8VIM6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
StrcQ8VIM6 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.94■□□□□ 0.3
StrcQ8VIM6 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
StrcQ8VIM6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
StrcQ8VIM6 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
StrcQ8VIM6 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
StrcQ8VIM6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
StrcQ8VIM6 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
StrcQ8VIM6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
StrcQ8VIM6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
StrcQ8VIM6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.94■□□□□ 0.3
StrcQ8VIM6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
StrcQ8VIM6 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.94■□□□□ 0.3
StrcQ8VIM6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
StrcQ8VIM6 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Gm13786-201ENSMUST00000122371 333 ntBASIC16.93■□□□□ 0.3
StrcQ8VIM6 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.93■□□□□ 0.3
StrcQ8VIM6 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
StrcQ8VIM6 BC037039-201ENSMUST00000192003 2205 ntBASIC16.93■□□□□ 0.3
StrcQ8VIM6 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.93■□□□□ 0.3
StrcQ8VIM6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC16.93■□□□□ 0.3
StrcQ8VIM6 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms