Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps4aQ8VEJ9 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Carlr-201ENSMUST00000181515 2574 ntBASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 AA543401-201ENSMUST00000164248 1269 ntBASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps4aQ8VEJ9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Gm13616-201ENSMUST00000120600 222 ntBASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Gm9682-201ENSMUST00000197505 556 ntBASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps4aQ8VEJ9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Vps4aQ8VEJ9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Vps4aQ8VEJ9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4aQ8VEJ9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Vps4aQ8VEJ9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4aQ8VEJ9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4aQ8VEJ9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4aQ8VEJ9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4aQ8VEJ9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4aQ8VEJ9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4aQ8VEJ9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4aQ8VEJ9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vps4aQ8VEJ9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms