Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
Top1mtQ8R4U6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.41■□□□□ 0.38
Top1mtQ8R4U6 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.41■□□□□ 0.38
Top1mtQ8R4U6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.41■□□□□ 0.38
Top1mtQ8R4U6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Top1mtQ8R4U6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Top1mtQ8R4U6 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Top1mtQ8R4U6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Top1mtQ8R4U6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Top1mtQ8R4U6 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Top1mtQ8R4U6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Top1mtQ8R4U6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Top1mtQ8R4U6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Top1mtQ8R4U6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Top1mtQ8R4U6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
Top1mtQ8R4U6 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Top1mtQ8R4U6 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.39■□□□□ 0.38
Top1mtQ8R4U6 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Gm14042-201ENSMUST00000120139 833 ntBASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Gm11543-201ENSMUST00000120758 370 ntBASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Top1mtQ8R4U6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Top1mtQ8R4U6 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms