Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Cd109Q8R422 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd109Q8R422 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cd109Q8R422 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd109Q8R422 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Cd109Q8R422 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cd109Q8R422 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cd109Q8R422 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd109Q8R422 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cd109Q8R422 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cd109Q8R422 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Cd109Q8R422 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cd109Q8R422 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cd109Q8R422 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cd109Q8R422 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cd109Q8R422 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC20.43■□□□□ 0.86
Cd109Q8R422 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
Cd109Q8R422 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC20.43■□□□□ 0.86
Cd109Q8R422 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cd109Q8R422 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cd109Q8R422 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cd109Q8R422 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC20.43■□□□□ 0.86
Cd109Q8R422 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
Cd109Q8R422 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cd109Q8R422 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC20.43■□□□□ 0.86
Cd109Q8R422 Gm5035-201ENSMUST00000215581 927 ntBASIC20.43■□□□□ 0.86
Cd109Q8R422 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC20.43■□□□□ 0.86
Cd109Q8R422 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Cd109Q8R422 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cd109Q8R422 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cd109Q8R422 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cd109Q8R422 Gm8131-201ENSMUST00000213783 1570 ntBASIC20.43■□□□□ 0.86
Cd109Q8R422 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd109Q8R422 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cd109Q8R422 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd109Q8R422 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd109Q8R422 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd109Q8R422 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd109Q8R422 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd109Q8R422 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Cd109Q8R422 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd109Q8R422 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd109Q8R422 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd109Q8R422 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd109Q8R422 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cd109Q8R422 Gm12960-201ENSMUST00000120017 1066 ntBASIC20.42■□□□□ 0.86
Cd109Q8R422 Gm15806-201ENSMUST00000120696 955 ntBASIC20.42■□□□□ 0.86
Cd109Q8R422 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd109Q8R422 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd109Q8R422 Gm44719-201ENSMUST00000206404 149 ntBASIC20.42■□□□□ 0.86
Cd109Q8R422 AC155729.1-201ENSMUST00000227758 544 ntBASIC20.42■□□□□ 0.86
Cd109Q8R422 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Cd109Q8R422 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd109Q8R422 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd109Q8R422 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd109Q8R422 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Cd109Q8R422 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd109Q8R422 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd109Q8R422 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Cd109Q8R422 Gm28911-201ENSMUST00000188837 117 ntBASIC20.41■□□□□ 0.86
Cd109Q8R422 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC20.41■□□□□ 0.86
Cd109Q8R422 AC139350.3-201ENSMUST00000226151 420 ntBASIC20.41■□□□□ 0.86
Cd109Q8R422 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Cd109Q8R422 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cd109Q8R422 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd109Q8R422 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd109Q8R422 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd109Q8R422 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd109Q8R422 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd109Q8R422 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cd109Q8R422 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd109Q8R422 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd109Q8R422 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd109Q8R422 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd109Q8R422 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd109Q8R422 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC20.4■□□□□ 0.86
Cd109Q8R422 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd109Q8R422 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Cd109Q8R422 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC20.4■□□□□ 0.86
Cd109Q8R422 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC20.4■□□□□ 0.86
Cd109Q8R422 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd109Q8R422 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cd109Q8R422 Gm18027-201ENSMUST00000218947 619 ntBASIC20.4■□□□□ 0.86
Cd109Q8R422 AC149294.4-201ENSMUST00000227870 882 ntBASIC20.4■□□□□ 0.86
Cd109Q8R422 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd109Q8R422 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd109Q8R422 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Cd109Q8R422 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Cd109Q8R422 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd109Q8R422 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd109Q8R422 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC20.4■□□□□ 0.86
Cd109Q8R422 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd109Q8R422 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd109Q8R422 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Cd109Q8R422 Gm4081-201ENSMUST00000195287 1838 ntBASIC20.4■□□□□ 0.86
Cd109Q8R422 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd109Q8R422 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd109Q8R422 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cd109Q8R422 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cd109Q8R422 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms