Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ebf4Q8K4J2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.27□□□□□ -0.29
Ebf4Q8K4J2 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.27□□□□□ -0.29
Ebf4Q8K4J2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Ebf4Q8K4J2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf4Q8K4J2 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ebf4Q8K4J2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Ebf4Q8K4J2 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf4Q8K4J2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ebf4Q8K4J2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf4Q8K4J2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf4Q8K4J2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf4Q8K4J2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf4Q8K4J2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf4Q8K4J2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf4Q8K4J2 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ebf4Q8K4J2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Ebf4Q8K4J2 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf4Q8K4J2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Gm15358-201ENSMUST00000119249 520 ntBASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Gm15794-201ENSMUST00000120182 631 ntBASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf4Q8K4J2 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ebf4Q8K4J2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf4Q8K4J2 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Ebf4Q8K4J2 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf4Q8K4J2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf4Q8K4J2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf4Q8K4J2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ebf4Q8K4J2 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ebf4Q8K4J2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms