Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rsph6aQ8CDR2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rsph6aQ8CDR2 Gm14042-201ENSMUST00000120139 833 ntBASIC18.91■□□□□ 0.62
Rsph6aQ8CDR2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rsph6aQ8CDR2 Gm9522-201ENSMUST00000182394 926 ntBASIC18.91■□□□□ 0.62
Rsph6aQ8CDR2 AC135669.1-201ENSMUST00000213585 412 ntBASIC18.91■□□□□ 0.62
Rsph6aQ8CDR2 Gm20445-201ENSMUST00000061905 565 ntBASIC18.91■□□□□ 0.62
Rsph6aQ8CDR2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rsph6aQ8CDR2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC18.91■□□□□ 0.62
Rsph6aQ8CDR2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rsph6aQ8CDR2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rsph6aQ8CDR2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rsph6aQ8CDR2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.91■□□□□ 0.62
Rsph6aQ8CDR2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rsph6aQ8CDR2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rsph6aQ8CDR2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC18.91■□□□□ 0.62
Rsph6aQ8CDR2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rsph6aQ8CDR2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rsph6aQ8CDR2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rsph6aQ8CDR2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph6aQ8CDR2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Rsph6aQ8CDR2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.89■□□□□ 0.61
Rsph6aQ8CDR2 Gm12882-201ENSMUST00000121696 517 ntBASIC18.89■□□□□ 0.61
Rsph6aQ8CDR2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph6aQ8CDR2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC18.89■□□□□ 0.61
Rsph6aQ8CDR2 Gm45195-201ENSMUST00000205597 1008 ntBASIC18.89■□□□□ 0.61
Rsph6aQ8CDR2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph6aQ8CDR2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph6aQ8CDR2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Rsph6aQ8CDR2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph6aQ8CDR2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.89■□□□□ 0.61
Rsph6aQ8CDR2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph6aQ8CDR2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph6aQ8CDR2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph6aQ8CDR2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph6aQ8CDR2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rsph6aQ8CDR2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rsph6aQ8CDR2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rsph6aQ8CDR2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph6aQ8CDR2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.87■□□□□ 0.61
Rsph6aQ8CDR2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph6aQ8CDR2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph6aQ8CDR2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph6aQ8CDR2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph6aQ8CDR2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph6aQ8CDR2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph6aQ8CDR2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rsph6aQ8CDR2 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph6aQ8CDR2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rsph6aQ8CDR2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms