Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Gm4995-201ENSMUST00000117247 432 ntBASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Gm25911-201ENSMUST00000157621 56 ntBASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Gm43514-201ENSMUST00000198852 424 ntBASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.01□□□□□ -0.01
Trub1Q8C0D0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trub1Q8C0D0 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trub1Q8C0D0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trub1Q8C0D0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trub1Q8C0D0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trub1Q8C0D0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trub1Q8C0D0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15□□□□□ -0.01
Trub1Q8C0D0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15□□□□□ -0.01
Trub1Q8C0D0 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15□□□□□ -0.01
Trub1Q8C0D0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trub1Q8C0D0 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15□□□□□ -0.01
Trub1Q8C0D0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trub1Q8C0D0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trub1Q8C0D0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Trub1Q8C0D0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trub1Q8C0D0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trub1Q8C0D0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trub1Q8C0D0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trub1Q8C0D0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trub1Q8C0D0 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trub1Q8C0D0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trub1Q8C0D0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trub1Q8C0D0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15□□□□□ -0.01
Trub1Q8C0D0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trub1Q8C0D0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Gm11543-201ENSMUST00000120758 370 ntBASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.99□□□□□ -0.01
Trub1Q8C0D0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trub1Q8C0D0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trub1Q8C0D0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms