Protein–RNA interactions for Protein: Q8BQN5

Fam78b, Protein FAM78B, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78bQ8BQN5 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Gm7977-201ENSMUST00000193787 748 ntBASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
Fam78bQ8BQN5 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Gm4459-201ENSMUST00000118750 468 ntBASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Gm12497-201ENSMUST00000138778 237 ntBASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam78bQ8BQN5 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Gm15165-201ENSMUST00000118140 502 ntBASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fam78bQ8BQN5 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms