Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Gm8399-201ENSMUST00000082300 1117 ntBASIC20.34■□□□□ 0.85
Usp54Q8BL06 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Usp54Q8BL06 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Usp54Q8BL06 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Usp54Q8BL06 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp54Q8BL06 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Usp54Q8BL06 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Usp54Q8BL06 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Usp54Q8BL06 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
Usp54Q8BL06 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp54Q8BL06 Gm14730-201ENSMUST00000122378 1045 ntBASIC20.33■□□□□ 0.84
Usp54Q8BL06 Gm27514-201ENSMUST00000183692 110 ntBASIC20.33■□□□□ 0.84
Usp54Q8BL06 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp54Q8BL06 Gm7498-201ENSMUST00000203282 1084 ntBASIC20.33■□□□□ 0.84
Usp54Q8BL06 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC20.33■□□□□ 0.84
Usp54Q8BL06 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp54Q8BL06 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp54Q8BL06 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC20.32■□□□□ 0.84
Usp54Q8BL06 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp54Q8BL06 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp54Q8BL06 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC20.32■□□□□ 0.84
Usp54Q8BL06 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp54Q8BL06 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp54Q8BL06 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp54Q8BL06 AC115735.4-201ENSMUST00000227460 1944 ntBASIC20.32■□□□□ 0.84
Usp54Q8BL06 Zscan30-202ENSMUST00000224144 1458 ntBASIC20.32■□□□□ 0.84
Usp54Q8BL06 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp54Q8BL06 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp54Q8BL06 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp54Q8BL06 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp54Q8BL06 Gm16342-201ENSMUST00000124025 1025 ntBASIC20.32■□□□□ 0.84
Usp54Q8BL06 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC20.32■□□□□ 0.84
Usp54Q8BL06 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC20.32■□□□□ 0.84
Usp54Q8BL06 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp54Q8BL06 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC20.32■□□□□ 0.84
Usp54Q8BL06 Gm24420-201ENSMUST00000176676 59 ntBASIC20.32■□□□□ 0.84
Usp54Q8BL06 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp54Q8BL06 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp54Q8BL06 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp54Q8BL06 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp54Q8BL06 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp54Q8BL06 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp54Q8BL06 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp54Q8BL06 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp54Q8BL06 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Usp54Q8BL06 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp54Q8BL06 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp54Q8BL06 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp54Q8BL06 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp54Q8BL06 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp54Q8BL06 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp54Q8BL06 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp54Q8BL06 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp54Q8BL06 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp54Q8BL06 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp54Q8BL06 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp54Q8BL06 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp54Q8BL06 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Usp54Q8BL06 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp54Q8BL06 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp54Q8BL06 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp54Q8BL06 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Usp54Q8BL06 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp54Q8BL06 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC20.3■□□□□ 0.84
Usp54Q8BL06 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp54Q8BL06 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Usp54Q8BL06 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC20.3■□□□□ 0.84
Usp54Q8BL06 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC20.3■□□□□ 0.84
Usp54Q8BL06 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp54Q8BL06 Gm18473-201ENSMUST00000220543 868 ntBASIC20.3■□□□□ 0.84
Usp54Q8BL06 Gm13859-201ENSMUST00000119936 1423 ntBASIC20.3■□□□□ 0.84
Usp54Q8BL06 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp54Q8BL06 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Usp54Q8BL06 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp54Q8BL06 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp54Q8BL06 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp54Q8BL06 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp54Q8BL06 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp54Q8BL06 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp54Q8BL06 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC20.3■□□□□ 0.84
Usp54Q8BL06 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp54Q8BL06 AC121801.1-201ENSMUST00000225363 1899 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms