Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Gm27486-201ENSMUST00000184923 80 ntBASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Gm5279-201ENSMUST00000199575 745 ntBASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Smg1Q8BKX6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Smg1Q8BKX6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Smg1Q8BKX6 Gm22323-201ENSMUST00000103832 109 ntBASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Gm12997-201ENSMUST00000120207 640 ntBASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Gm5523-201ENSMUST00000180415 997 ntBASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Gm43947-201ENSMUST00000203019 959 ntBASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Gm3222-201ENSMUST00000071282 990 ntBASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Gm12928-201ENSMUST00000117115 573 ntBASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Smg1Q8BKX6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Gm43758-201ENSMUST00000199500 367 ntBASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Gm45865-201ENSMUST00000211815 945 ntBASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Gm11793-201ENSMUST00000120433 981 ntBASIC12.07□□□□□ -0.48
Smg1Q8BKX6 B9d1os-201ENSMUST00000137010 674 ntBASIC12.07□□□□□ -0.48
Smg1Q8BKX6 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Gm27331-201ENSMUST00000183705 60 ntBASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Celf4-206ENSMUST00000224553 1729 ntBASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Smg1Q8BKX6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smg1Q8BKX6 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Smg1Q8BKX6 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Smg1Q8BKX6 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Smg1Q8BKX6 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms