Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Chmp2bQ8BJF9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp2bQ8BJF9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Gm7862-201ENSMUST00000121461 292 ntBASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Chmp2bQ8BJF9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Gm7153-201ENSMUST00000117092 455 ntBASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Gm11452-201ENSMUST00000122376 690 ntBASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp2bQ8BJF9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms