Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Srrm3Q80WV7 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Gm25911-201ENSMUST00000157621 56 ntBASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Gm7230-201ENSMUST00000173026 815 ntBASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Srrm3Q80WV7 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Srrm3Q80WV7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm3Q80WV7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Srrm3Q80WV7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm3Q80WV7 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm3Q80WV7 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Srrm3Q80WV7 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm3Q80WV7 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm3Q80WV7 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm3Q80WV7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm3Q80WV7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm3Q80WV7 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.14■□□□□ 0.01
Srrm3Q80WV7 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.14■□□□□ 0.01
Srrm3Q80WV7 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm3Q80WV7 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Srrm3Q80WV7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm3Q80WV7 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Srrm3Q80WV7 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Srrm3Q80WV7 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm3Q80WV7 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Srrm3Q80WV7 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Srrm3Q80WV7 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms