Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.17□□□□□ -0.14
Ubfd1Q78JW9 Mir6977-201ENSMUST00000184960 64 ntBASIC14.17□□□□□ -0.14
Ubfd1Q78JW9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ubfd1Q78JW9 Gm45453-201ENSMUST00000211758 853 ntBASIC14.17□□□□□ -0.14
Ubfd1Q78JW9 Gm16476-201ENSMUST00000221544 139 ntBASIC14.17□□□□□ -0.14
Ubfd1Q78JW9 Shd-206ENSMUST00000225145 998 ntBASIC14.17□□□□□ -0.14
Ubfd1Q78JW9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubfd1Q78JW9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubfd1Q78JW9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubfd1Q78JW9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ubfd1Q78JW9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubfd1Q78JW9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Ubfd1Q78JW9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ubfd1Q78JW9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubfd1Q78JW9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubfd1Q78JW9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubfd1Q78JW9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Gm27321-201ENSMUST00000185021 205 ntBASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubfd1Q78JW9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Dupd1-202ENSMUST00000224735 548 ntBASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubfd1Q78JW9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Gm12428-201ENSMUST00000119844 727 ntBASIC14.14□□□□□ -0.15
Ubfd1Q78JW9 Mir1897-201ENSMUST00000122581 272 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms